A Segemehl Manual (version 0.1.7; Rev 1)

Lacking alignments? The next-generation sequencing mapper segemehl revisited

MOTIVATION Next-generation sequencing has become an important tool in molecular biology. Various protocols to investigate genomic, transcriptomic and epigenomic features across virtually all species and tissues have been devised. For most of these experiments, one of the first crucial steps of bioinformatic analysis is the mapping of reads to reference genomes. RESULTS Here, we present thorou...

NUREG/CR-6119 Vol 2 Rev 2 [2:3] "MELCOR Computer Code Manuals: Reference Manuals Version 1.8.5" S102520-02

The MELCOR Core (COR) package calculates the thermal response of the core and lower plenum internal structures, including the portion of the lower head directly below the core. The package also models the relocation of core and lower plenum structural materials during melting, slumping, and debris formation, including failure of the reactor vessel and ejection of debris into the reactor cavity....

AKARI / IRC All - Sky Survey Point Source Catalogue Version 1 . 0 – Release Note ( Rev . 1 ) – AKARI / IRC Team Prepared

The AKARI/IRC Point Source Catalogue Version 1.0 provides positions and fluxes of 870,973 sources (844,649 sources in 9μm band and 194,551 sources in 18μm band) in the Mid-Infrared wavelengths. This document describes the outline of the data processing and calibration, and basic performance of the released catalogue. The users of the catalogue are requested to read this document carefully befor...

JNCC 2 user manual and tutorial ( rev 1 )

This paper introduces JNCC2, the Java implementation of the Naive Credal Classifier 2 (NCC2). JNCC2 is open source; it is hence freely available together with manual, sources and javadoc documentation. NCC2 is an extension of Naive Bayes Classifier (NBC) to imprecise probabilities, designed so as to return robust classifications even on small and/or incomplete data sets. A peculiar feature of N...

NUREG/CR-6119 Vol 2 Rev 2 [3:3] "MELCOR Computer Code Manuals: Reference Manuals Version 1.8.5" S102520-03X